alarmtimer: Make sure we initialize the rtctimer

jonghwan Choi reported seeing warnings with the alarmtimer
code at suspend/resume time, and pointed out that the
rtctimer isn't being properly initialized.

This patch corrects this issue.

Reported-by: jonghwan Choi <jhbird.choi@gmail.com>
Signed-off-by: John Stultz <john.stultz@linaro.org>